Fix clicking of find and download areas on file page

## What does this MR do?

Fixes the stacking context of the file page so the find and download areas can be clicked

## Are there points in the code the reviewer needs to double check?

Ney

## Why was this MR needed?

We wanna click them. :(

## What are the relevant issue numbers?

Closes #18340.

## Screenshots (if relevant)

![Screen_Shot_2016-06-09_at_18.46.05](/uploads/1650a2fb1b9119ad1e27badf31f49340/Screen_Shot_2016-06-09_at_18.46.05.png)

## Does this MR meet the acceptance criteria?

- [ ] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- [ ] Tests
  - [ ] Added for this feature/bug
  - [ ] All builds are passing
- [x] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [x] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [x] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4574

Updated CHANGELOG

Removed CHANGELOG entry

added hover state to top nav links

## What does this MR do?

Adds hover state to top nav links.

## Are there points in the code the reviewer needs to double check?

Ney.

## Why was this MR needed?

UX.

## What are the relevant issue numbers?

Closes #18301.

## Screenshots (if relevant)

![Screen_Shot_2016-06-07_at_23.23.45](/uploads/dac8ed99eca99fbcccbd98028e947ee1/Screen_Shot_2016-06-07_at_23.23.45.png)

See merge request !4521

Replace raphael-rails with raphael.js and split it from the rest of the JS

## What does this MR do?

Removes raphael.js and its related libraries from the default JS bundle.

It also removes raphael-rails because the gem is unmaintained and – for whatever reason – didn't want to cooperate with the way I was trying to require it.

This brings the default (compressed and minified) application.js from 354KB after the d3 MR (!4394) down to 324KB.

## Are there points in the code the reviewer needs to double check?

That tests pass and that there aren't errors on any pages (especially the Network page).

## Why was this MR needed?

It's only used on the Network page and was using way too much bandwidth for just one page.

## What are the relevant issue numbers?

#14372 #13165 

Follow-up to !4394 and !4516.

cc: @jschatz1 

See merge request !4519

Show categorised search queries in the search autocomplete

Fixes #5885 

It works in 3 categories, Dashboard, Groups and Project.

## Dashboard context
![for-dashboard](/uploads/3a59f6ec008a972495597c8f2691c385/for-dashboard.png)

## Group context
![for-group](/uploads/f7aa413d56330a1d9b2e5562f95badf7/for-group.png)

## Project context
![for-project](/uploads/dabe04cf8758a056cf7b03da001ffd91/for-project.png)


## Screencast
![category-search-dropdown](/uploads/4d9513dcd6ccb6e24adefdf65f9bc778/category-search-dropdown.gif)



See merge request !4499

Due date can be removed from milestones

## What does this MR do?

Adds a button to milestone form to allow user to remove due date 

## What are the relevant issue numbers?

Closes #15063 

## Screenshots (if relevant)

![Screen_Shot_2016-06-02_at_08.32.03](/uploads/8bd4446abde745dd5b1e140a887ec694/Screen_Shot_2016-06-02_at_08.32.03.png)

See merge request !4428

Fixed issue with bold in issuable sidebar

## What does this MR do?

~~The sidebar contained both normal font weight & bold font weight, so this standardises them to bold.~~

After looking at the designs, i've updated the font weights & colors throughout the sidebar to correctly match them

## Screenshots (if relevant)

![Screen_Shot_2016-06-02_at_11.03.40](/uploads/0a3eb6a67ce5722c77f6adf2fe883017/Screen_Shot_2016-06-02_at_11.03.40.png)


See merge request !4398

Add shortcut to copy file content hash link

## What does this MR do?

* Allows for multiple shortcut handlers to be initialised
* Adds `y` shortcut to file pages to copy permalink URL.

## Are there points in the code the reviewer needs to double check?

Ney.

## Why was this MR needed?

UX

## What are the relevant issue numbers?

Closes #14470.

## Screenshots (if relevant)

![y-shortcut](/uploads/b81feb26d8e0d7d4996c4afa29f385d7/y-shortcut.gif)

See merge request !4496

New issue shortcut doesnt work on some pages

## What does this MR do?

1. Slightly tidies dispatcher switch case by utilising 'fall through' cases.
2. Adds shortcuts to project pipelines, milestones, builds and forks pages

## Are there points in the code the reviewer needs to double check?

I have a feeling that these may have been missed out of the case statements on purpose?

## Why was this MR needed?

Possible UX issue highlighted in #17929.

## What are the relevant issue numbers?

Closes #17929.

Closes #12616. (dup)

Closes #18123. (dup)

Closes #13688. (dup)

## Screenshots (if relevant)

See merge request !4393

Updated CHANGELOG

Removed CHANGELOG entry

Updated commits UI

Closes #14633 

See merge request !4271

Get rid of Gitlab::ShellEnv

Remove obsolete code we once needed for Grack and satellites.

See merge request !4673

Resolve "Change admin navigation to match new UI"

## What does this MR do?
Moves admin navigation to layout nav to match Project, Groups, and Profile navigation

## Are there points in the code the reviewer needs to double check?

## Why was this MR needed?

## What are the relevant issue numbers?
Closes #18338

## Screenshots (if relevant)
![Screen_Shot_2016-06-14_at_10.26.40_AM](/uploads/f0b8c8b259da16d929be2b36e8eeafb8/Screen_Shot_2016-06-14_at_10.26.40_AM.png)
![Screen_Shot_2016-06-14_at_10.26.44_AM](/uploads/07d9ece2063dfcfec1f0f2647d8ee782/Screen_Shot_2016-06-14_at_10.26.44_AM.png)
## Does this MR meet the acceptance criteria?

- [ ] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- [ ] Tests
  - [ ] Added for this feature/bug
  - [ ] All builds are passing
- [ ] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [ ] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [ ] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4650

Prevent default disabled buttons and links.

## What does this MR do?
Prevents default action for disabled buttons and links. If the element has `.btn` and `.disabled` at the same time, its default action will be prevented.

## Are there points in the code the reviewer needs to double check?
Yes. Is there a better way to do that?

## Why was this MR needed?
Right now we can click disabled links and it cause some troubles like in #18079.

## What are the relevant issue numbers?
Fixes #18079

## Screenshots (if relevant)
![disabled-click](/uploads/48b58ce130f843e530e62632bcc27436/disabled-click.gif)

## Does this MR meet the acceptance criteria?

- [x] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- [x] Tests
  - [x] Added for this feature/bug
  - [x] All builds are passing
- [x] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [x] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [x] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4658

Show number of processed MRs in milestone page

closes #14025 

![Screen_Shot_2016-05-02_at_6.20.34_PM](/uploads/9208e58c0e0c77133bd73332ee3b3342/Screen_Shot_2016-05-02_at_6.20.34_PM.png)

See merge request !4006

Signed-off-by: Dmitriy Zaporozhets <dmitriy.zaporozhets@gmail.com>

Add index on `requested_at` to the `members` table

See merge request !4679

Fixed issue with MR buttons being in a group

## What does this MR do?

Fixes design issue with the buttons in the merge request widget

## Screenshots (if relevant)

![Screen_Shot_2016-06-09_at_14.13.32](/uploads/44ac4175f5a97a8d7baf97be6eebc684/Screen_Shot_2016-06-09_at_14.13.32.png)


See merge request !4562

Check if the Users table has exactly one user limiting the whole set

## What does this MR do?

Limit the query set so about a full scan for all the rows on the users table (only scan to records)

#18225 

See merge request !4492

Add support for Docker Registry manifest v1

## What does this MR do?

Adds support for Manifest V1 generated by older versions of Docker (before 1.10).

## What are the relevant issue numbers?

Fixes https://gitlab.com/gitlab-org/gitlab-ce/issues/18609


See merge request !4669

Fixed issue with de-selecting dropdown option in issue sidebar

## What does this MR do?

When de-selecting either an assignee or milestone, we try to send `undefined` which jQuery removes from the request causing a routing error. Instead this MR sends `null` which jQuery still sends and then correctly removes either the milestone or assignee. 

## What are the relevant issue numbers?

Closes #18641 

## Screenshots (if relevant)

![assignee](/uploads/6eaca416fb6e31eabf4c038967160c07/assignee.gif)

## Does this MR meet the acceptance criteria?

- [ ] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- [ ] Tests
  - [ ] Added for this feature/bug
  - [ ] All builds are passing
- [ ] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [ ] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [ ] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4671

Signed-off-by: Rémy Coutable <remy@rymai.me>

Update project star/unstar tooltip

## What does this MR do?
Fixes project toggle star button tooltip to show actual tooltip for its state.

## Are there points in the code the reviewer needs to double check?
No.

## Why was this MR needed?
- When you star a project tooltip wasn't changing.
- When you star a project and refresh the page, tooltip was still showing `Star Project`

## What are the relevant issue numbers?
Fixes #18143

## Screenshots (if relevant)

### Before 
![Screen_Shot_2016-06-15_at_15.31.57](/uploads/e005951c23eeed7c2761a0ec1911f3ce/Screen_Shot_2016-06-15_at_15.31.57.png)

### After
![tooltip-change](/uploads/4caec99eac6ffcc7331947fdfdb9e051/tooltip-change.gif)

## Does this MR meet the acceptance criteria?

- [x] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [ ] [Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)
- [ ] API support added
- [ ] Tests
  - [ ] Added for this feature/bug
  - [ ] All builds are passing
- [x] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [x] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [x] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4672

Signed-off-by: Dmitriy Zaporozhets <dmitriy.zaporozhets@gmail.com>

Eager load project relations in IssueParser

## What does this MR do?

This changes the ReferenceParser class to eager load various associations. This in turn results in the permissions checking code (e.g. the `Ability` model) to _not_ run dozens if not hundreds of extra SQL queries depending on the amount of references involved (in a single document).

## Are there points in the code the reviewer needs to double check?

No.

## Why was this MR needed?

In !4410 it was revealed a _lot_ of a queries came from the `Ability` model and the code it would call. In many cases this was because the code would simply get a project, then get the owners; or get a group, then get some association of that. Eager loading these associations is a fairly simple solution and greatly cuts down the number of queries.

## What are the relevant issue numbers?

None.

## Does this MR meet the acceptance criteria?

- [x] [CHANGELOG](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CHANGELOG) entry added
- [x] ~~[Documentation created/updated](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/doc/development/doc_styleguide.md)~~
- [x] ~~API support added~~
- [ ] Tests
  - [x] ~~Added for this feature/bug~~
  - [ ] All builds are passing
- [x] Conform by the [style guides](https://gitlab.com/gitlab-org/gitlab-ce/blob/master/CONTRIBUTING.md#style-guides)
- [ ] Branch has no merge conflicts with `master` (if you do - rebase it please)
- [x] [Squashed related commits together](https://git-scm.com/book/en/Git-Tools-Rewriting-History#Squashing-Commits)

See merge request !4675

Remove div between ul and li

## What does this MR do?
Adds `container_class`to `ul` instead of `div` for valid HTML

## What are the relevant issue numbers?
https://gitlab.com/gitlab-org/gitlab-ce/merge_requests/4592#note_12420843



See merge request !4633

Award Emoji can't be awarded on system notes backend



See merge request !4668