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Joanne Hugé
slapos
Commits
8f133f2b
Commit
8f133f2b
authored
May 04, 2015
by
Kazuhiko Shiozaki
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version up : R 3.1.2.
also use our own libraries more. clean up rpy2 component.
parent
73fe28f6
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30 additions
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12 deletions
+30
-12
component/r-language/buildout.cfg
component/r-language/buildout.cfg
+22
-9
component/rpy2/buildout.cfg
component/rpy2/buildout.cfg
+8
-3
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component/r-language/buildout.cfg
View file @
8f133f2b
[buildout]
extends =
../
readline
/buildout.cfg
../
bzip2
/buildout.cfg
../gcc/buildout.cfg
../pcre/buildout.cfg
../readline/buildout.cfg
../xz-utils/buildout.cfg
../zlib/buildout.cfg
parts =
gcc-fortran
...
...
@@ -9,14 +13,23 @@ parts =
[r-language]
recipe = slapos.recipe.cmmi
url = http://cran.irsn.fr/src/base/R-3/R-3.1.
0
.tar.gz
md5sum =
a1ee52446bee81820409661e6d114ab1
url = http://cran.irsn.fr/src/base/R-3/R-3.1.
2
.tar.gz
md5sum =
3af29ec06704cbd08d4ba8d69250ae74
configure-options =
--with-readline=yes
--with-x=no
--enable-R-shlib
--with-readline=yes
--without-tcltk
--without-cairo
--without-libpng
--without-jpeglib
--without-libtiff
--with-system-zlib
--with-system-bzlib
--with-system-pcre
--with-system-xz
--without-ICU
--without-x
environment =
CC=${gcc-fortran:location}/bin/gcc
F77=${gcc-fortran:location}/bin/gfortran
CFLAGS=-I${readline:location}/include -I${ncurses:location}/include
LDFLAGS=-L${gcc-fortran:location}/lib64 -Wl,-rpath=${gcc-fortran:location}/lib64 -L${readline:location}/lib -Wl,-rpath=${readline:location}/lib -L${ncurses:location}/lib/ -Wl,-rpath=${ncurses:location}/lib/
PATH=${gcc-fortran:location}/bin:%(PATH)s
CPPFLAGS=-I${bzip2:location}/include -I${pcre:location}/include -I${readline5:location}/include -I${ncurses:location}/include -I${xz-utils:location}/include -I${zlib:location}/include
LDFLAGS=-L${bzip2:location}/lib -Wl,-rpath=${bzip2:location}/lib -L${gcc-fortran:location}/lib -Wl,-rpath=${gcc-fortran:location}/lib -L${gcc-fortran:location}/lib64 -Wl,-rpath=${gcc-fortran:location}/lib64 -L${ncurses:location}/lib -Wl,-rpath=${ncurses:location}/lib -L${pcre:location}/lib -Wl,-rpath=${pcre:location}/lib -L${readline5:location}/lib -Wl,-rpath=${readline5:location}/lib -L${xz-utils:location}/lib -Wl,-rpath=${xz-utils:location}/lib -L${zlib:location}/lib -Wl,-rpath=${zlib:location}/lib
component/rpy2/buildout.cfg
View file @
8f133f2b
[buildout]
extends =
../gcc/buildout.cfg
../pcre/buildout.cfg
../r-language/buildout.cfg
../xz-utils/buildout.cfg
# rpy2 needs R in $PATH
# to use rpy2 you need a wrapper that sets ${r-language:location}/bin in PATH
# see ../manpy/buildout.cfg as an example
[rpy2_env]
PATH = ${gcc-fortran:location}/bin:${r-language:location}/bin/:%(PATH)s
CFLAGS = -I${readline:location}/include
LDFLAGS = -L${readline:location}/lib -Wl,-rpath=${readline:location}/lib -L${r-language:location}/lib/R/lib -Wl,-rpath=${r-language:location}/lib/R/lib
PATH = ${gcc-fortran:location}/bin:${r-language:location}/bin:%(PATH)s
[rpy2]
recipe = zc.recipe.egg:custom
...
...
@@ -23,3 +23,8 @@ initialization =
rpath =
${gcc-fortran:location}/lib
${gcc-fortran:location}/lib64
${pcre:location}/lib
${xz-utils:location}/lib
library-dirs =
${pcre:location}/lib
${xz-utils:location}/lib
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