Commit 978dbbd0 authored by Michael Kozono's avatar Michael Kozono

Port of mk-add-old-attachments-to-uploads-table to EE

parent 0fb58cf6
---
title: Add untracked files to uploads table
merge_request: 15270
author:
type: other
# See http://doc.gitlab.com/ce/development/migration_style_guide.html
# for more information on how to write migrations for GitLab.
class SetUploadsPathSizeForMysql < ActiveRecord::Migration
include Gitlab::Database::MigrationHelpers
# Set this constant to true if this migration requires downtime.
DOWNTIME = false
def up
# We need at least 297 at the moment. For more detail on that number, see:
# https://gitlab.com/gitlab-org/gitlab-ce/issues/40168#what-is-the-expected-correct-behavior
#
# Rails + PostgreSQL `string` is equivalent to a `text` field, but
# Rails + MySQL `string` is `varchar(255)` by default. Also, note that we
# have an upper limit because with a unique index, MySQL has a max key
# length of 3072 bytes which seems to correspond to `varchar(1024)`.
change_column :uploads, :path, :string, limit: 511
end
def down
# It was unspecified, which is varchar(255) by default in Rails for MySQL.
change_column :uploads, :path, :string
end
end
# See http://doc.gitlab.com/ce/development/migration_style_guide.html
# for more information on how to write migrations for GitLab.
class TrackUntrackedUploads < ActiveRecord::Migration
include Gitlab::Database::MigrationHelpers
disable_ddl_transaction!
DOWNTIME = false
MIGRATION = 'PrepareUntrackedUploads'
def up
BackgroundMigrationWorker.perform_async(MIGRATION)
end
def down
if table_exists?(:untracked_files_for_uploads)
drop_table :untracked_files_for_uploads
end
end
end
......@@ -2216,7 +2216,7 @@ ActiveRecord::Schema.define(version: 20171124165823) do
create_table "uploads", force: :cascade do |t|
t.integer "size", limit: 8, null: false
t.string "path", null: false
t.string "path", limit: 511, null: false
t.string "checksum", limit: 64
t.integer "model_id"
t.string "model_type"
......
# frozen_string_literal: true
module Gitlab
module BackgroundMigration
# This class processes a batch of rows in `untracked_files_for_uploads` by
# adding each file to the `uploads` table if it does not exist.
class PopulateUntrackedUploads # rubocop:disable Metrics/ClassLength
# This class is responsible for producing the attributes necessary to
# track an uploaded file in the `uploads` table.
class UntrackedFile < ActiveRecord::Base # rubocop:disable Metrics/ClassLength, Metrics/LineLength
self.table_name = 'untracked_files_for_uploads'
# Ends with /:random_hex/:filename
FILE_UPLOADER_PATH = %r{/\h+/[^/]+\z}
FULL_PATH_CAPTURE = %r{\A(.+)#{FILE_UPLOADER_PATH}}
# These regex patterns are tested against a relative path, relative to
# the upload directory.
# For convenience, if there exists a capture group in the pattern, then
# it indicates the model_id.
PATH_PATTERNS = [
{
pattern: %r{\A-/system/appearance/logo/(\d+)/},
uploader: 'AttachmentUploader',
model_type: 'Appearance'
},
{
pattern: %r{\A-/system/appearance/header_logo/(\d+)/},
uploader: 'AttachmentUploader',
model_type: 'Appearance'
},
{
pattern: %r{\A-/system/note/attachment/(\d+)/},
uploader: 'AttachmentUploader',
model_type: 'Note'
},
{
pattern: %r{\A-/system/user/avatar/(\d+)/},
uploader: 'AvatarUploader',
model_type: 'User'
},
{
pattern: %r{\A-/system/group/avatar/(\d+)/},
uploader: 'AvatarUploader',
model_type: 'Namespace'
},
{
pattern: %r{\A-/system/project/avatar/(\d+)/},
uploader: 'AvatarUploader',
model_type: 'Project'
},
{
pattern: FILE_UPLOADER_PATH,
uploader: 'FileUploader',
model_type: 'Project'
}
].freeze
def to_h
@upload_hash ||= {
path: upload_path,
uploader: uploader,
model_type: model_type,
model_id: model_id,
size: file_size,
checksum: checksum
}
end
def upload_path
# UntrackedFile#path is absolute, but Upload#path depends on uploader
@upload_path ||=
if uploader == 'FileUploader'
# Path relative to project directory in uploads
matchd = path_relative_to_upload_dir.match(FILE_UPLOADER_PATH)
matchd[0].sub(%r{\A/}, '') # remove leading slash
else
path
end
end
def uploader
matching_pattern_map[:uploader]
end
def model_type
matching_pattern_map[:model_type]
end
def model_id
return @model_id if defined?(@model_id)
pattern = matching_pattern_map[:pattern]
matchd = path_relative_to_upload_dir.match(pattern)
# If something is captured (matchd[1] is not nil), it is a model_id
# Only the FileUploader pattern will not match an ID
@model_id = matchd[1] ? matchd[1].to_i : file_uploader_model_id
end
def file_size
File.size(absolute_path)
end
def checksum
Digest::SHA256.file(absolute_path).hexdigest
end
private
def matching_pattern_map
@matching_pattern_map ||= PATH_PATTERNS.find do |path_pattern_map|
path_relative_to_upload_dir.match(path_pattern_map[:pattern])
end
unless @matching_pattern_map
raise "Unknown upload path pattern \"#{path}\""
end
@matching_pattern_map
end
def file_uploader_model_id
matchd = path_relative_to_upload_dir.match(FULL_PATH_CAPTURE)
not_found_msg = <<~MSG
Could not capture project full_path from a FileUploader path:
"#{path_relative_to_upload_dir}"
MSG
raise not_found_msg unless matchd
full_path = matchd[1]
project = Project.find_by_full_path(full_path)
return nil unless project
project.id
end
# Not including a leading slash
def path_relative_to_upload_dir
upload_dir = Gitlab::BackgroundMigration::PrepareUntrackedUploads::RELATIVE_UPLOAD_DIR # rubocop:disable Metrics/LineLength
base = %r{\A#{Regexp.escape(upload_dir)}/}
@path_relative_to_upload_dir ||= path.sub(base, '')
end
def absolute_path
File.join(CarrierWave.root, path)
end
end
# This class is used to query the `uploads` table.
class Upload < ActiveRecord::Base
self.table_name = 'uploads'
end
def perform(start_id, end_id)
return unless migrate?
files = UntrackedFile.where(id: start_id..end_id)
processed_files = insert_uploads_if_needed(files)
processed_files.delete_all
drop_temp_table_if_finished
end
private
def migrate?
UntrackedFile.table_exists? && Upload.table_exists?
end
def insert_uploads_if_needed(files)
filtered_files, error_files = filter_error_files(files)
filtered_files = filter_existing_uploads(filtered_files)
filtered_files = filter_deleted_models(filtered_files)
insert(filtered_files)
processed_files = files.where.not(id: error_files.map(&:id))
processed_files
end
def filter_error_files(files)
files.partition do |file|
begin
file.to_h
true
rescue => e
msg = <<~MSG
Error parsing path "#{file.path}":
#{e.message}
#{e.backtrace.join("\n ")}
MSG
Rails.logger.error(msg)
false
end
end
end
def filter_existing_uploads(files)
paths = files.map(&:upload_path)
existing_paths = Upload.where(path: paths).pluck(:path).to_set
files.reject do |file|
existing_paths.include?(file.upload_path)
end
end
# There are files on disk that are not in the uploads table because their
# model was deleted, and we don't delete the files on disk.
def filter_deleted_models(files)
ids = deleted_model_ids(files)
files.reject do |file|
ids[file.model_type].include?(file.model_id)
end
end
def deleted_model_ids(files)
ids = {
'Appearance' => [],
'Namespace' => [],
'Note' => [],
'Project' => [],
'User' => []
}
# group model IDs by model type
files.each do |file|
ids[file.model_type] << file.model_id
end
ids.each do |model_type, model_ids|
model_class = Object.const_get(model_type)
found_ids = model_class.where(id: model_ids.uniq).pluck(:id)
deleted_ids = ids[model_type] - found_ids
ids[model_type] = deleted_ids
end
ids
end
def insert(files)
rows = files.map do |file|
file.to_h.merge(created_at: 'NOW()')
end
Gitlab::Database.bulk_insert('uploads',
rows,
disable_quote: :created_at)
end
def drop_temp_table_if_finished
if UntrackedFile.all.empty?
UntrackedFile.connection.drop_table(:untracked_files_for_uploads,
if_exists: true)
end
end
end
end
end
# frozen_string_literal: true
module Gitlab
module BackgroundMigration
# This class finds all non-hashed uploaded file paths and saves them to a
# `untracked_files_for_uploads` table.
class PrepareUntrackedUploads # rubocop:disable Metrics/ClassLength
# For bulk_queue_background_migration_jobs_by_range
include Database::MigrationHelpers
FIND_BATCH_SIZE = 500
RELATIVE_UPLOAD_DIR = "uploads".freeze
ABSOLUTE_UPLOAD_DIR = "#{CarrierWave.root}/#{RELATIVE_UPLOAD_DIR}".freeze
FOLLOW_UP_MIGRATION = 'PopulateUntrackedUploads'.freeze
START_WITH_CARRIERWAVE_ROOT_REGEX = %r{\A#{CarrierWave.root}/}
EXCLUDED_HASHED_UPLOADS_PATH = "#{ABSOLUTE_UPLOAD_DIR}/@hashed/*".freeze
EXCLUDED_TMP_UPLOADS_PATH = "#{ABSOLUTE_UPLOAD_DIR}/tmp/*".freeze
# This class is used to iterate over batches of
# `untracked_files_for_uploads` rows.
class UntrackedFile < ActiveRecord::Base
include EachBatch
self.table_name = 'untracked_files_for_uploads'
end
def perform
ensure_temporary_tracking_table_exists
# Since Postgres < 9.5 does not have ON CONFLICT DO NOTHING, and since
# doing inserts-if-not-exists without ON CONFLICT DO NOTHING would be
# slow, start with an empty table for Postgres < 9.5.
# That way we can do bulk inserts at ~30x the speed of individual
# inserts (~20 minutes worth of inserts at GitLab.com scale instead of
# ~10 hours).
# In all other cases, installations will get both bulk inserts and the
# ability for these jobs to retry without having to clear and reinsert.
clear_untracked_file_paths unless can_bulk_insert_and_ignore_duplicates?
store_untracked_file_paths
schedule_populate_untracked_uploads_jobs
end
private
def ensure_temporary_tracking_table_exists
table_name = :untracked_files_for_uploads
unless UntrackedFile.connection.table_exists?(table_name)
UntrackedFile.connection.create_table table_name do |t|
t.string :path, limit: 600, null: false
t.index :path, unique: true
end
end
end
def clear_untracked_file_paths
UntrackedFile.delete_all
end
def store_untracked_file_paths
return unless Dir.exist?(ABSOLUTE_UPLOAD_DIR)
each_file_batch(ABSOLUTE_UPLOAD_DIR, FIND_BATCH_SIZE) do |file_paths|
insert_file_paths(file_paths)
end
end
def each_file_batch(search_dir, batch_size, &block)
cmd = build_find_command(search_dir)
Open3.popen2(*cmd) do |stdin, stdout, status_thread|
yield_paths_in_batches(stdout, batch_size, &block)
raise "Find command failed" unless status_thread.value.success?
end
end
def yield_paths_in_batches(stdout, batch_size, &block)
paths = []
stdout.each_line("\0") do |line|
paths << line.chomp("\0").sub(START_WITH_CARRIERWAVE_ROOT_REGEX, '')
if paths.size >= batch_size
yield(paths)
paths = []
end
end
yield(paths)
end
def build_find_command(search_dir)
cmd = %W[find -L #{search_dir}
-type f
! ( -path #{EXCLUDED_HASHED_UPLOADS_PATH} -prune )
! ( -path #{EXCLUDED_TMP_UPLOADS_PATH} -prune )
-print0]
ionice = which_ionice
cmd = %W[#{ionice} -c Idle] + cmd if ionice
log_msg = "PrepareUntrackedUploads find command: \"#{cmd.join(' ')}\""
Rails.logger.info log_msg
cmd
end
def which_ionice
Gitlab::Utils.which('ionice')
rescue StandardError
# In this case, returning false is relatively safe,
# even though it isn't very nice
false
end
def insert_file_paths(file_paths)
sql = insert_sql(file_paths)
ActiveRecord::Base.connection.execute(sql)
end
def insert_sql(file_paths)
if postgresql_pre_9_5?
"INSERT INTO #{table_columns_and_values_for_insert(file_paths)};"
elsif postgresql?
"INSERT INTO #{table_columns_and_values_for_insert(file_paths)}"\
" ON CONFLICT DO NOTHING;"
else # MySQL
"INSERT IGNORE INTO"\
" #{table_columns_and_values_for_insert(file_paths)};"
end
end
def table_columns_and_values_for_insert(file_paths)
values = file_paths.map do |file_path|
ActiveRecord::Base.send(:sanitize_sql_array, ['(?)', file_path]) # rubocop:disable GitlabSecurity/PublicSend, Metrics/LineLength
end.join(', ')
"#{UntrackedFile.table_name} (path) VALUES #{values}"
end
def postgresql?
@postgresql ||= Gitlab::Database.postgresql?
end
def can_bulk_insert_and_ignore_duplicates?
!postgresql_pre_9_5?
end
def postgresql_pre_9_5?
@postgresql_pre_9_5 ||= postgresql? &&
Gitlab::Database.version.to_f < 9.5
end
def schedule_populate_untracked_uploads_jobs
bulk_queue_background_migration_jobs_by_range(
UntrackedFile, FOLLOW_UP_MIGRATION)
end
end
end
end
......@@ -120,15 +120,21 @@ module Gitlab
# values.
# return_ids - When set to true the return value will be an Array of IDs of
# the inserted rows, this only works on PostgreSQL.
def self.bulk_insert(table, rows, return_ids: false)
# disable_quote - A key or an Array of keys to exclude from quoting (You
# become responsible for protection from SQL injection for
# these keys!)
def self.bulk_insert(table, rows, return_ids: false, disable_quote: [])
return if rows.empty?
keys = rows.first.keys
columns = keys.map { |key| connection.quote_column_name(key) }
return_ids = false if mysql?
disable_quote = Array(disable_quote).to_set
tuples = rows.map do |row|
row.values_at(*keys).map { |value| connection.quote(value) }
keys.map do |k|
disable_quote.include?(k) ? row[k] : connection.quote(row[k])
end
end
sql = <<-EOF
......
......@@ -47,13 +47,6 @@ module Gitlab
Random.rand(Float::MAX.to_i).to_s(36)
end
# EE below
def try_megabytes_to_bytes(size)
Integer(size).megabytes
rescue ArgumentError
size
end
# See: http://stackoverflow.com/questions/2108727/which-in-ruby-checking-if-program-exists-in-path-from-ruby
# Cross-platform way of finding an executable in the $PATH.
#
......@@ -70,5 +63,12 @@ module Gitlab
nil
end
# EE below
def try_megabytes_to_bytes(size)
Integer(size).megabytes
rescue ArgumentError
size
end
end
end
require 'spec_helper'
describe Gitlab::BackgroundMigration::PrepareUntrackedUploads, :sidekiq do
include TrackUntrackedUploadsHelpers
let!(:untracked_files_for_uploads) { described_class::UntrackedFile }
matcher :be_scheduled_migration do |*expected|
match do |migration|
BackgroundMigrationWorker.jobs.any? do |job|
job['args'] == [migration, expected]
end
end
failure_message do |migration|
"Migration `#{migration}` with args `#{expected.inspect}` not scheduled!"
end
end
before do
DatabaseCleaner.clean
drop_temp_table_if_exists
end
after do
drop_temp_table_if_exists
end
around do |example|
# Especially important so the follow-up migration does not get run
Sidekiq::Testing.fake! do
example.run
end
end
it 'ensures the untracked_files_for_uploads table exists' do
expect do
described_class.new.perform
end.to change { ActiveRecord::Base.connection.table_exists?(:untracked_files_for_uploads) }.from(false).to(true)
end
it 'has a path field long enough for really long paths' do
described_class.new.perform
component = 'a' * 255
long_path = [
'uploads',
component, # project.full_path
component # filename
].flatten.join('/')
record = untracked_files_for_uploads.create!(path: long_path)
expect(record.reload.path.size).to eq(519)
end
context "test bulk insert with ON CONFLICT DO NOTHING or IGNORE" do
around do |example|
# If this is CI, we use Postgres 9.2 so this whole context should be
# skipped since we're unable to use ON CONFLICT DO NOTHING or IGNORE.
if described_class.new.send(:can_bulk_insert_and_ignore_duplicates?)
example.run
end
end
context 'when files were uploaded before and after hashed storage was enabled' do
let!(:appearance) { create_or_update_appearance(logo: uploaded_file, header_logo: uploaded_file) }
let!(:user) { create(:user, :with_avatar) }
let!(:project1) { create(:project, :with_avatar) }
let(:project2) { create(:project) } # instantiate after enabling hashed_storage
before do
# Markdown upload before enabling hashed_storage
UploadService.new(project1, uploaded_file, FileUploader).execute
stub_application_setting(hashed_storage_enabled: true)
# Markdown upload after enabling hashed_storage
UploadService.new(project2, uploaded_file, FileUploader).execute
end
it 'adds unhashed files to the untracked_files_for_uploads table' do
described_class.new.perform
expect(untracked_files_for_uploads.count).to eq(5)
end
it 'adds files with paths relative to CarrierWave.root' do
described_class.new.perform
untracked_files_for_uploads.all.each do |file|
expect(file.path.start_with?('uploads/')).to be_truthy
end
end
it 'does not add hashed files to the untracked_files_for_uploads table' do
described_class.new.perform
hashed_file_path = project2.uploads.where(uploader: 'FileUploader').first.path
expect(untracked_files_for_uploads.where("path like '%#{hashed_file_path}%'").exists?).to be_falsey
end
it 'correctly schedules the follow-up background migration jobs' do
described_class.new.perform
expect(described_class::FOLLOW_UP_MIGRATION).to be_scheduled_migration(1, 5)
expect(BackgroundMigrationWorker.jobs.size).to eq(1)
end
# E.g. from a previous failed run of this background migration
context 'when there is existing data in untracked_files_for_uploads' do
before do
described_class.new.perform
end
it 'does not error or produce duplicates of existing data' do
expect do
described_class.new.perform
end.not_to change { untracked_files_for_uploads.count }.from(5)
end
end
# E.g. The installation is in use at the time of migration, and someone has
# just uploaded a file
context 'when there are files in /uploads/tmp' do
let(:tmp_file) { Rails.root.join(described_class::ABSOLUTE_UPLOAD_DIR, 'tmp', 'some_file.jpg') }
before do
FileUtils.touch(tmp_file)
end
after do
FileUtils.rm(tmp_file)
end
it 'does not add files from /uploads/tmp' do
described_class.new.perform
expect(untracked_files_for_uploads.count).to eq(5)
end
end
end
end
context 'test bulk insert without ON CONFLICT DO NOTHING or IGNORE' do
before do
# If this is CI, we use Postgres 9.2 so this stub has no effect.
#
# If this is being run on Postgres 9.5+ or MySQL, then this stub allows us
# to test the bulk insert functionality without ON CONFLICT DO NOTHING or
# IGNORE.
allow_any_instance_of(described_class).to receive(:postgresql_pre_9_5?).and_return(true)
end
context 'when files were uploaded before and after hashed storage was enabled' do
let!(:appearance) { create_or_update_appearance(logo: uploaded_file, header_logo: uploaded_file) }
let!(:user) { create(:user, :with_avatar) }
let!(:project1) { create(:project, :with_avatar) }
let(:project2) { create(:project) } # instantiate after enabling hashed_storage
before do
# Markdown upload before enabling hashed_storage
UploadService.new(project1, uploaded_file, FileUploader).execute
stub_application_setting(hashed_storage_enabled: true)
# Markdown upload after enabling hashed_storage
UploadService.new(project2, uploaded_file, FileUploader).execute
end
it 'adds unhashed files to the untracked_files_for_uploads table' do
described_class.new.perform
expect(untracked_files_for_uploads.count).to eq(5)
end
it 'adds files with paths relative to CarrierWave.root' do
described_class.new.perform
untracked_files_for_uploads.all.each do |file|
expect(file.path.start_with?('uploads/')).to be_truthy
end
end
it 'does not add hashed files to the untracked_files_for_uploads table' do
described_class.new.perform
hashed_file_path = project2.uploads.where(uploader: 'FileUploader').first.path
expect(untracked_files_for_uploads.where("path like '%#{hashed_file_path}%'").exists?).to be_falsey
end
it 'correctly schedules the follow-up background migration jobs' do
described_class.new.perform
expect(described_class::FOLLOW_UP_MIGRATION).to be_scheduled_migration(1, 5)
expect(BackgroundMigrationWorker.jobs.size).to eq(1)
end
# E.g. from a previous failed run of this background migration
context 'when there is existing data in untracked_files_for_uploads' do
before do
described_class.new.perform
end
it 'does not error or produce duplicates of existing data' do
expect do
described_class.new.perform
end.not_to change { untracked_files_for_uploads.count }.from(5)
end
end
# E.g. The installation is in use at the time of migration, and someone has
# just uploaded a file
context 'when there are files in /uploads/tmp' do
let(:tmp_file) { Rails.root.join(described_class::ABSOLUTE_UPLOAD_DIR, 'tmp', 'some_file.jpg') }
before do
FileUtils.touch(tmp_file)
end
after do
FileUtils.rm(tmp_file)
end
it 'does not add files from /uploads/tmp' do
described_class.new.perform
expect(untracked_files_for_uploads.count).to eq(5)
end
end
end
end
# Very new or lightly-used installations that are running this migration
# may not have an upload directory because they have no uploads.
context 'when no files were ever uploaded' do
it 'does not add to the untracked_files_for_uploads table (and does not raise error)' do
described_class.new.perform
expect(untracked_files_for_uploads.count).to eq(0)
end
end
end
......@@ -199,6 +199,22 @@ describe Gitlab::Database do
described_class.bulk_insert('test', rows)
end
it 'does not quote values of a column in the disable_quote option' do
[1, 2, 4, 5].each do |i|
expect(connection).to receive(:quote).with(i)
end
described_class.bulk_insert('test', rows, disable_quote: :c)
end
it 'does not quote values of columns in the disable_quote option' do
[2, 5].each do |i|
expect(connection).to receive(:quote).with(i)
end
described_class.bulk_insert('test', rows, disable_quote: [:a, :c])
end
it 'handles non-UTF-8 data' do
expect { described_class.bulk_insert('test', [{ a: "\255" }]) }.not_to raise_error
end
......
require 'spec_helper'
describe Gitlab::Utils do
delegate :to_boolean, :boolean_to_yes_no, :slugify, :random_string, to: :described_class
delegate :to_boolean, :boolean_to_yes_no, :slugify, :random_string, :which, to: :described_class
describe '.slugify' do
{
......@@ -60,9 +60,6 @@ describe Gitlab::Utils do
end
end
# EE
delegate :which, to: :described_class
describe '.which' do
it 'finds the full path to an executable binary' do
expect(File).to receive(:executable?).with('/bin/sh').and_return(true)
......
require 'spec_helper'
require Rails.root.join('db', 'post_migrate', '20171103140253_track_untracked_uploads')
describe TrackUntrackedUploads, :migration, :sidekiq do
include TrackUntrackedUploadsHelpers
matcher :be_scheduled_migration do
match do |migration|
BackgroundMigrationWorker.jobs.any? do |job|
job['args'] == [migration]
end
end
failure_message do |migration|
"Migration `#{migration}` with args `#{expected.inspect}` not scheduled!"
end
end
it 'correctly schedules the follow-up background migration' do
Sidekiq::Testing.fake! do
migrate!
expect(described_class::MIGRATION).to be_scheduled_migration
expect(BackgroundMigrationWorker.jobs.size).to eq(1)
end
end
end
module TrackUntrackedUploadsHelpers
def uploaded_file
fixture_path = Rails.root.join('spec', 'fixtures', 'rails_sample.jpg')
fixture_file_upload(fixture_path)
end
def ensure_temporary_tracking_table_exists
Gitlab::BackgroundMigration::PrepareUntrackedUploads.new.send(:ensure_temporary_tracking_table_exists)
end
def drop_temp_table_if_exists
ActiveRecord::Base.connection.drop_table(:untracked_files_for_uploads) if ActiveRecord::Base.connection.table_exists?(:untracked_files_for_uploads)
end
def create_or_update_appearance(attrs)
a = Appearance.first_or_initialize(title: 'foo', description: 'bar')
a.update!(attrs)
a
end
end
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