Also implement the InnoDB changes for group commit into innodb_plugin.

hold the latch across the 2-phase commit, and it is already released at
start of prepare (if not before).

Rename trx->active_trans to active_flag; since we changed the semantics of
the field, renaming should help prevent silent merge errors.

Implement binlog_optimize_thread_scheduling option to allow benchmarking the
effect of running commit_ordered() for multiple transactions all in one
thread.

mysql-test/suite/sphinx/suite.pm:
  Update test to support 1.10-beta
storage/maria/unittest/ma_test_all-t:
  Fixed old filenames

- Added ORDER BY to get consistent results to federated_server
- Sort slow tests first

mysql-test/lib/My/ConfigFactory.pm:
  Remove usage of port as the test suite is not using that anymore and it causes some probelms in buildbot
mysql-test/lib/mtr_cases.pm:
  Sort slow tests first
  If a test is marked as 'big_test' also mark it as 'long_test'
mysql-test/suite/federated/federated_server.result:
  Added ORDER BY to get consistent results
mysql-test/suite/federated/federated_server.test:
  Added ORDER BY to get consistent results

mysql-test/suite/parts/t/partition_alter4_innodb.test:
  Removed duplicated big_test marker
sql-common/my_time.c:
  Get rid of compiler warning about uninitialized members

Taged a couple of tests with --big-test

configure.in:
  Upgrade version number
mysql-test/suite/parts/t/partition_alter1_1_2_innodb.test:
  Removed duplicate big_test tag
mysql-test/suite/parts/t/partition_alter1_2_innodb.test:
  Removed duplicate big_test tag
mysql-test/suite/parts/t/partition_decimal_innodb.test:
  Added big_test tag as this takes forever with valgrind
mysql-test/suite/parts/t/partition_decimal_myisam.test:
  Removed duplicate big_test tag

Changed some String.ptr() -> String.c_ptr() for String that are not guaranteed to end with \0
Removed some c_ptr() usage from parameters to functions that takes ptr & length
Use preallocate buffers to avoid calling malloc() for most operations. 


sql/event_db_repository.cc:
  alias is now a String
sql/event_scheduler.cc:
  c_ptr -> c_ptr_safe() to avoid warnings from valgrind.
sql/events.cc:
  c_ptr -> c_ptr_safe() to avoid warnings from valgrind.
  c_ptr -> ptr() as function takes ptr & length
sql/field.cc:
  alias is now a String
sql/field.h:
  alias is now a String
sql/ha_partition.cc:
  alias is now a String
sql/handler.cc:
  alias is now a String
  ptr() -> c_ptr() as string is not guaranteed to be \0 terminated
sql/item.cc:
  Store error parameter in separarte buffer to ensure correct error message
sql/item_func.cc:
  ptr() -> c_ptr_safe() as string is not guaranteed to be \0 terminated
sql/item_sum.h:
  Use my_strtod() instead of my_atof() to not have to make string \0 terminated
sql/lock.cc:
  alias is now a String
sql/log.cc:
  c_ptr() -> ptr() as function takes ptr & length
sql/log_event.cc:
  c_ptr_quick() -> ptr() as we only want to get the pointer to String buffer
sql/opt_range.cc:
  ptr() -> c_ptr() as string is not guaranteed to be \0 terminated
sql/opt_table_elimination.cc:
  alias is now a String
sql/set_var.cc:
  ptr() -> c_ptr() as string is not guaranteed to be \0 terminated
  c_ptr() -> c_ptr_safe() to avoid warnings from valgrind.
  c_ptr() -> ptr() as function takes ptr & length
  Simplify some code.
sql/sp.cc:
  c_ptr() -> ptr() as function takes ptr & length
sql/sp_rcontext.cc:
  alias is now a String
sql/sql_base.cc:
  alias is now a String.
  Here we win a realloc() for most alias usage.
sql/sql_class.cc:
  Use size descriptor for printf() to avoid accessing bytes outside of buffer
sql/sql_insert.cc:
  Change allocation of TABLE as it's now contains a String
  _ptr() -> ptr() as function takes ptr & length
sql/sql_load.cc:
  Use preallocate buffers to avoid calling malloc() for most operations.
sql/sql_parse.cc:
  Use c_ptr_safe() to ensure string is \0 terminated.
sql/sql_plugin.cc:
  c_ptr_quick() -> ptr() as function takes ptr & length
sql/sql_select.cc:
  alias is now a String
sql/sql_show.cc:
  alias is now a String
sql/sql_string.h:
  Added move() function to change who owns the string (owner does the free)
sql/sql_table.cc:
  alias is now a String
  c_ptr() -> c_ptr_safe() to avoid warnings from valgrind.
sql/sql_test.cc:
  c_ptr() -> c_ptr_safe() to avoid warnings from valgrind.
  alias is now a String
sql/sql_trigger.cc:
  c_ptr() -> c_ptr_safe() to avoid warnings from valgrind.
  Use field->init() to setup pointers to alias.
sql/sql_update.cc:
  alias is now a String
sql/sql_view.cc:
  ptr() -> c_ptr_safe() as string is not guaranteed to be \0 terminated
sql/sql_yacc.yy:
  r() -> c_ptr() as string is not guaranteed to be \0 terminated
sql/table.cc:
  alias is now a String
sql/table.h:
  alias is now a String
storage/federatedx/ha_federatedx.cc:
  Remove extra 1 byte alloc that is automaticly done by strmake()
  Ensure that error message ends with \0
storage/maria/ha_maria.cc:
  alias is now a String
storage/myisam/ha_myisam.cc:
  alias is now a String

When compiled with SAFEMALLOC or with Windows
Debug CRT, it allocates and initializes 5GB of memory.
The effect is 20 minutes of paging and swapping on
a 4GB VM.

Still allow the test to run with optimized binaries.
Memory is not initialized in this case,  malloc() 
of 5GB  size will not bring the whole buffer into 
physical memory.

- Fix signed/unsigned warning (error -Werror) in readline
- change regex_replace pattern to account for forward or backward slashes 
   in partition_recover_myisam ( fixes Windows/embedded)

Plugins do not work on Windows/embedded,
thus do not set plugin environment variables.

mysql-test/suite/parts/t/partition_debug_sync_innodb.test:
  Fixed failure on windows partition file is with small '#p#'

cmd-line-utils/readline/complete.c:
  Don't ignore value from fwrite()
cmd-line-utils/readline/terminal.c:
  Don't ignore value from fwrite()
extra/yassl/taocrypt/include/file.hpp:
  Changed prototype to be able to return value from fwrite()
extra/yassl/taocrypt/src/file.cpp:
  Return value from fwrite for put()
storage/xtradb/ut/ut0ut.c:
  Added casts to remove warnings for not critical usage of fwrite()

The reason for the crash is misalignment on SSE instruciton
in setjmp(). The root cause is PBXT debug malloc(),  which
unlike  OS malloc  does not guarantee 16 bytes alignment.

So the fix for now is disable PBXT debug malloc on Windows.
It was obsolete anyway, as  it does not provide additional
benefits to C runtime debug routines (always used in debug 
compilation) or to pageheap, available at runtime.

- Fixed main.mysqlcheck error on windows
- Fixed 'can't drop database pbxt' failure when running pbxt.mysqlslap


sql/table.cc:
  When using not legal file names for checking a non existing table, one got a warning in the log file which caused mysql.mysqlcheck to fail
storage/innodb_plugin/row/row0upd.c:
  Fixed compiler warning
storage/pbxt/src/table_xt.cc:
  Remove table that is dropped from 'repair-pending'.
  Fixed 'can't drop database pbxt' failure when running pbxt.mysqlslap

- Fixed mysql-test-run failures on window
- Fixed compiler warnings from my last push (sorry about that)
- Fixed that maria_chk --repair --extended works again
- Fixed compiler warnings about using not unitialized data

mysql-test/mysql-test-run.pl:
  Better output
mysql-test/suite/parts/inc/partition_check_drop.inc:
  Use remove_files_wildcard instead of rm
mysys/safemalloc.c:
  Fixed argument to printf
storage/maria/ma_cache.c:
  Don't give errors when running maria_chk
storage/maria/ma_dynrec.c:
  Don't give errors when running maria_chk
storage/maria/ma_rt_test.c:
  Added option --datadir for where to put logs and test data
storage/maria/ma_test1.c:
  Added option --datadir for where to put logs and test data
storage/maria/ma_test2.c:
  Added option --datadir for where to put logs and test data
storage/maria/maria_chk.c:
  If --datadir is used but --logdir is not, set --logdir from --datadir
  (this reflects how --help said how things should work)
storage/maria/maria_read_log.c:
  Changed short option for 'maria-log-dir-path' from -l to -h to be same as mysqld, maria_chk, ma_test1 etc..
storage/maria/unittest/ma_test_all-t:
  Allow one to specify --tmpdir for where to store logs and data
storage/xtradb/buf/buf0buf.c:
  Fixed compiler warnings about using not unitialized data
storage/xtradb/row/row0upd.c:
  Fixed compiler warnings about using not unitialized data
storage/xtradb/srv/srv0srv.c:
  Fixed compiler warnings about using not unitialized data

- Reduced memory requirements for mysqltest to 1/4.th  This also gave a speedup for 5x for some tests.
- Reduced memory usage from safe_mutex.
- Fixed problem with failing tests that could not restart mysqld becasue the port was reserved
- More DBUG information
- Fixed bug where bitmap_set_prefix() wrote over buffer area.
- Initialize n_pages_flushed in xtradb which was used uninitialized.

client/mysqltest.cc:
  Reduced memory usage (400K -> 80 for simple test;  400M -> 70M for some other tests)
  - Smaller dynamic arrays at start
  - Made 'st_connection' significantly smaller by allocation 'mysql' on demand in mysql_init() and storing require_file in a mem_root.
  - Fixed that when one does --debug we get information from safemalloc in the trace
  (Most of changes are changing &connect->mysql to connect->mysql
libmysql/libmysql.c:
  Don't call mysql_thread_end() if my_init() was called outside of mysql_server_init()
  This is needed to get information from my_end() into the DBUG log
mysql-test/README:
  Fixed wrong comment
mysql-test/mysql-test-run.pl:
  Reserv 20 ports / mysql-test-run thread.
  (Needed as some tests uses 9 mysqld servers)
mysys/hash.c:
  More DBUG information
mysys/my_bitmap.c:
  Fixed bug where bitmap_set_prefix() wrote over buffer area.
mysys/safemalloc.c:
  More DBUG information
mysys/thr_mutex.c:
  Initialize smaller arrays be default.
sql-common/client.c:
  More DBUG_PRINT
storage/xtradb/srv/srv0srv.c:
  Initialize n_pages_flushed which was used uninitialized.

- Removed references to deleted files
- If we link staticly, check for static zlib
  - This should fix the problem with 'no -lz found' link error
- Fixed build failure on window (Patch from Wlad)
- Fixed build problem with federatedx when using -Werror

BUILD/Makefile.am:
  Remove removed file
config/ac-macros/zlib.m4:
  If we compile with --all-static, test that we have a static libz
libmysqld/CMakeLists.txt:
  Fix for build error on windows
mysql-test/suite/pbxt/r/key_cache.result:
  Updated result
mysql-test/suite/pbxt/t/key_cache.test:
  Fixed not updated test case
sql/CMakeLists.txt:
  Fix for build error on windows
storage/federatedx/Makefile.am:
  Don't use CFLAGS to compile C++ programs
storage/pbxt/src/lock_xt.cc:
  Fixed compiler warning about using uninitialized b2
storage/xtradb/buf/buf0buf.c:
  Fixed wrong printf
storage/xtradb/srv/srv0srv.c:
  Fixed assignment of different width and test with different sign/unsigned

Fixed test failure that ended with "There is no group named 'mysqld.10' that can be used to resolve 'port' for test"

mysql-test/lib/My/ConfigFactory.pm:
  Added test name to error output
mysql-test/mysql-test-run.pl:
  Added testname as part of ConfigFactory for better error message
mysql-test/suite/rpl/t/rpl_test_framework.cnf:
  Added space after # to ensure that ConfigFactory treat comments as comments

mysql-test/r/innodb-zip.result:
  File has been moved to suite/innodb_plugin
mysql-test/t/innodb-zip.test:
  File has been moved to suite/innodb_plugin

(4 tests are still failing, so this push is not yet stable)

- Fixed some issues with partitions and connection_string, which also fixed lp:716890 "Pre- and post-recovery crash in Aria"
- Fixed wrong assert in Aria

Now need to merge with latest xtradb before pushing 

sql/ha_partition.cc:
  Ensure that m_ordered_rec_buffer is not freed before close.
sql/mysqld.cc:
  Changed to use opt_stack_trace instead of opt_pstack.
  Removed references to pstack
sql/partition_element.h:
  Ensure that connect_string is initialized
storage/maria/ma_key_recover.c:
  Fixed wrong assert