Add support for LIMIT # OFFSET #
Changed lock handling:  Now all locks should be stored in TABLE_LIST instead of passed to functions.
Don't call query_cache_invalidate() twice in some cases
mysql_change_user() now clears states to be equal to close + connect.
Fixed a bug with multi-table-update and multi-table-delete when used with LOCK TABLES
Fixed a bug with replicate-do and UPDATE

Fix bug when server hang(with SSL, with modified libmysql)
Add options master-ssl-capath and master-ssl-cipher
Add some error checking(SSL) 

   differences in HPUX11)

Improve mysql-test to be more robust.
Fix that GRANT doesn't delete SSL options
Change innobase_flush_log_at_trx_commit to uint.
Don't rotate logs if we read a rotate log entry from the master.

Check if AND/OR expression can be NULL; Fixed bug in GROUP BY and-or-expression where expression could be NULL
Bug fix for SHOW OPEN TABLES when user didn't have privilege to access all open tables.
Better fix for ALTER TABLE on BDB tables.

Fixed hang in start_slave_threads() when thread dies quickly.

More DBUG info for replication
Better error messages from replication
Fixed bug in replication code when connecting to 'localhost' (time was not released properly)
Block ALARM signal on Linux for signal handler thread (Fixes problem with running mysqld with --debug)
Removed warning when setting an AUTO_INCREMENT field to NULL

Fixed configure problems with HPUX and openbsd
SHOW SLAVE STATUS returns empty set if slave is not initialized
SHOW MASTER STATUS returns empty set if binary logging is not enabled.
Fixed shutdown problem on Solaris.

Fix for syntax error bug in SET TRANSACTION ISOLATION

Make safe_mysqld a symlink to mysqld_safe in binary distribution
Fixed problem with CTRL-C when using mysqld --bootstrap

Made a some new buffers thread specific and changeable.
Resize of key_buffer.
AUTO_COMMIT -> AUTOCOMMIT
Fixed mutex bug in DROP DATABASE
Fixed bug when using auto_increment as second part of a key where first part could include NULL.
Split handler->extra() to extra() and extra_opt() to be able to support thread specific buffers.
Don't write message to error log when slave reconnects becasue of timeout.
Fixed possible update problem when using DELETE/UPDATE on small tables
(In some cases we used index even if table scanning would be better)
A lot of minior code cleanups

Added statistics information for alarms (for bug tracking)
Don't store "incomplete" in the xxx.cfg file if we are not using --restart. (Crash-me)
Enlarged STACK_BUF_ALLOC becasue of failed crash-me test
Aded new script mysql_tableinfo to make a system directory.

(All commit emails since 4.0.1 checked)
This had to be done now, before the 4.1 tree changes to much, to make it easy to propagate bug fixes to the 4.1 tree.

Change TRUNCATE(number) to truncate towards zero for negative numbers
Fix NULL handling for DESCRIBE table_name

Changed some status variable names
Fix bug in GRANT ... PASSWORD string

Fixed slowdown problem on win98
Fixed syntax for ALTER TABLE .. RENAME

Changed in client library character-set-dir -> character-sets-dir

Fixed stack overflow checking with crash-me with gcc 3.0.4
Using @@unknown_variable doesn't hang client anymore
Added @@VERSION variable

Don't use DBUG library for struct st_my_thread_var to make code less complicated.

Fix bug when using option groups

Fix for --enable-local-infile
Portability fix for bison

Fixed data corruption bug in query cache.
Made queries be dependent of the database in use.

Changed 'send_file_to_server' to use less stack (Fixed replication problem on OSF1).

Added new operators to be used with gcc 3.0.x
Update of query cache code.
Added semaphores for Windows (not yet in use)
Added pthread_mutex_trylock for windows.

Fixed memory leak on shutdown (Affects the embedded version & MyODBC)

not found by the client.  This is especially important for PHP, which
only includes the latin1 character set in the bundled libmysql.

Merged error messages with 3.23.44
Fixed bug with DATA DIRECTORY on windows

removal of duplicate code in mf_iocache.cc 
work on failsafe replication
work on SEQ_READ_APPEND io cache

Added missing InnoDB variables to SHOW VARIABLES.
Fixed bug when doing WHERE 'column_name=NULL' on an indexed column that had NULL values.
Fixed bug when doing 'LEFT JOIN ...  ON (column_name = constant) WHERE column_name = constant'

Safer, a bit faster filesort.
Code changes to avoid calls to current_thd() (faster code).
Removed all compiler warnings from readline.

use $MAX_TABLES mysqltest variable to make join test portable
make test now works with the manager on IA64 Linux